BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D05SP1|AL427613
(1054 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1224 619 e-177
>3x_Contig1224
Length = 5948
Score = 619 bits (309), Expect = e-177
Identities = 644/757 (85%)
Strand = Plus / Plus
Query: 178 attaatttattggtttattatatgaaaatataaaattatgtdggataaatwaattttaga 237
||||||||||| |||| || ||||||| ||| ||| ||| |||||||| |||||||||
Sbjct: 3127 attaatttattcgtttcttctatgaaactatcccattctgtcggataaatcaattttaga 3186
Query: 238 tattaaaataatgtgataatggaattgtaagtttatgatttgatgatatattttaaaatt 297
|||| |||||||||||| ||||||||| ||||| || ||||||||||| ||||||| ||
Sbjct: 3187 tattccaataatgtgatactggaattgtcagtttctgctttgatgatatcttttaaactt 3246
Query: 298 aaaattattttwtatttgtaatgtgggattaaaagggagaatgtaggaatattttagata 357
|| |||||||| | |||||||||||||||||||| |||||||||||| ||||||| |||
Sbjct: 3247 aacattattttctctttgtaatgtgggattaaaacggagaatgtaggcatattttcgatc 3306
Query: 358 gattttgagtttggtaaagggaaatgtaaagaatgtgaaaaaratgttaatattattagt 417
|||| || || |||||||||| |||||||||| |||| |||| |||||||| || || ||
Sbjct: 3307 gattctgcgtctggtaaagggcaatgtaaagactgtgcaaaaaatgttaatcttcttcgt 3366
Query: 418 aattattttgaattattaaataaaattgaaataaagaaatgataatwtgttgaaaaaaga 477
| || |||||| || ||||||| |||| |||||||||||| || |||||| ||||||
Sbjct: 3367 acttcttttgacttcttaaatacccttgacctaaagaaatgatcatctgttgacaaaaga 3426
Query: 478 agtgaaggttttaagaggttataataatttgttagatggaaaatraatatttagaaatga 537
||||| |||||||||||||||| || |||||||||||||||||| ||| ||| || |||
Sbjct: 3427 agtgacggttttaagaggttatcatcatttgttagatggaaaatcaatctttcgacatgc 3486
Query: 538 tatttgaatataagattttrtaggtacatggagtatattatttrattaaaaaaatatgaa 597
| |||| |||||||||||| | ||||||||||||||||||||| ||| | || | ||||
Sbjct: 3487 tctttgcatataagattttctcggtacatggagtatattatttcattccacaactctgaa 3546
Query: 598 ataataataatgttaaattattaattagaaggaaatattttaagttttatattattwgta 657
|||||| ||||||| ||| || ||||||||| ||||||||||||||||| ||||| ||
Sbjct: 3547 ataatactaatgttccattcttcattagaaggcaatattttaagttttatcttattcgtc 3606
Query: 658 aagataaagaaaaagtttttaaatggagttaagtgaataattaaaatgtagatggatatg 717
||| ||| |||| ||||||| |||||||||||||| | ||| |||||||||||| ||
Sbjct: 3607 aagctaacgaaacagtttttccatggagttaagtgactcattcccatgtagatggatctg 3666
Query: 718 gttagggagaatattgagttgtagataaaataaaaaagataagtgtwaagtaaatataaa 777
|||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||
Sbjct: 3667 gttagggagaatattgagttgtagatcacataccaaagataagtgtcaagtaaatataaa 3726
Query: 778 aaaaaattagttgmgaaaaataaaagaagtaaaaatttagtaaaatgaataaaaagggaa 837
| ||||||||||| || ||||| ||||||||||||||||| |||| || |||||| |
Sbjct: 3727 acaaaattagttgcgaccaataacagaagtaaaaatttagtccaatgcctacaaagggca 3786
Query: 838 gaatgaagtatggtatatgttaaaatgaaattaaaatttgattggaaaaggtaaattgat 897
|| ||||||||||||| |||| | || |||| ||||||||||||||||||| ||| |
Sbjct: 3787 gactgaagtatggtatctgttccactgcaattcaaatttgattggaaaaggtcccttgct 3846
Query: 898 gggttttttattgatgtaaaaaggaagaagtatgttt 934
|||||||||||||||||| ||||||||||||||||||
Sbjct: 3847 gggttttttattgatgtacaaaggaagaagtatgttt 3883
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,470
Number of Sequences: 1807
Number of extensions: 15470
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 1054
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1038
effective length of database: 10,329,639
effective search space: 10722165282
effective search space used: 10722165282
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)